PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.D00078.1.p
Common NameLOC105955074, MIMGU_mgv1a012761mg
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family WRKY
Protein Properties Length: 242aa    MW: 27490.9 Da    PI: 4.8695
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.D00078.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY94.76.4e-3053111259
                       --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
              WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                       +D ++WrKYGqK++kgs++pr+YY+C+++ gC++kk+ver+++d ++++itY+++Hnh+
  Migut.D00078.1.p  53 SDCWSWRKYGQKPIKGSPYPRGYYKCSTSkGCSAKKQVERCKTDASMLIITYTSTHNHP 111
                       699***********************9988****************************7 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.807.1E-3145113IPR003657WRKY domain
SuperFamilySSF1182902.35E-2548113IPR003657WRKY domain
SMARTSM007746.3E-3452112IPR003657WRKY domain
PROSITE profilePS5081130.77953113IPR003657WRKY domain
PfamPF031068.6E-2554111IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 242 aa     Download sequence    Send to blast
MQEIDHHSSE SNCSTLAEEM HASKKRKVAE RTVVAVKIQG NDKRQHRNEG PPSDCWSWRK  60
YGQKPIKGSP YPRGYYKCST SKGCSAKKQV ERCKTDASML IITYTSTHNH PGPDSTLATN  120
HKQDPDEINE EITDDQPTTP KQEQEAELTI PDQETNGEDR FQYSQSPFNS NQEDSNFQEN  180
LETSSVLYDQ DPKPFTHGGP MEFSSEENDF FDELEELPSS SFFKSFMRSS FCKDRSIVNP  240
S*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2ayd_A1e-16541131674WRKY transcription factor 1
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012834230.10.0PREDICTED: probable WRKY transcription factor 35
TrEMBLA0A022S2170.0A0A022S217_ERYGU; Uncharacterized protein
STRINGVIT_07s0005g01520.t011e-79(Vitis vinifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA112812025
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G34830.11e-35WRKY DNA-binding protein 35